BioGRID([path, file_resources, …])
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BioMart([host, verbose, cache, secure])
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Interface to the BioMart service |
BioMartManager(dataset, attributes, host, …)
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Database(path[, file_resources, col_rename, …])
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This is a base class used to instantiate an external Database given a a set of files from either local files or URLs. |
Dict(*args, **kwds)
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EnsemblGeneSequences([biomart, attributes, …])
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EnsemblGenes([biomart, attributes, host, …])
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EnsemblSNP([biomart, attributes, host, …])
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EnsemblSomaticVariation([biomart, …])
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EnsemblTranscriptSequences([biomart, …])
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GTEx([path, file_resources, col_rename, …])
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GeneMania(path[, file_resources, …])
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Interactions(path, file_resources[, …])
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List(*args, **kwds)
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LncBase(path[, file_resources, …])
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LncRNA2Target([path, file_resources, …])
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LncReg(path, file_resources[, …])
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MiRTarBase([path, file_resources, …])
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NONCODE(path[, file_resources, col_rename, …])
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NPInter([path, file_resources, …])
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ProteinAtlas([path, file_resources, …])
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RNAcentral([path, file_resources, …])
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STRING([path, file_resources, species_id, …])
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SequenceDatabase([replace_U2T])
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Provides a series of methods to extract sequence data from SequenceDataset. |
StarBase(path, file_resources[, …])
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StringIO([initial_value, newline])
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Text I/O implementation using an in-memory buffer. |
TANRIC(path[, file_resources, col_rename, …])
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TargetScan(path[, file_resources, …])
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lncRInter(path[, file_resources, …])
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lncRNome(path, file_resources[, …])
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