EnsemblGenes#
- class openomics.database.annotation.EnsemblGenes(biomart='hsapiens_gene_ensembl', attributes=None, host='www.ensembl.org', blocksize=None)[source][source]#
Bases:
openomics.database.annotation.BioMartManager
,openomics.database.base.Database
Attributes Summary
Methods Summary
load_data
(dataset, attributes, host[, ...])- param dataset
Attributes Documentation
- COLUMNS_RENAME_DICT = {'ensembl_gene_id': 'gene_id', 'ensembl_transcript_id': 'transcript_id', 'external_gene_name': 'gene_name', 'external_transcript_name': 'transcript_name', 'rfam': 'Rfams'}[source]#
Methods Documentation