DisGeNet#

class openomics.database.disease.DisGeNet(path='https://www.disgenet.org/static/disgenet_ap1/files/downloads/', file_resources=None, curated=True, col_rename={'diseaseName': 'disease_associations', 'geneSymbol': 'gene_name'}, **kwargs)[source][source]#

Bases: openomics.database.disease.DiseaseAssociation

Loads the database from .

Default path: . Default file_resources: {

“”: “”, “”: “”, “”: “”,

}

Attributes Summary

Methods Summary

load_dataframe(file_resources[, blocksize])

param file_resources

Attributes Documentation

COLUMNS_RENAME_DICT = {'diseaseName': 'disease_associations', 'geneSymbol': 'gene_name'}[source]#

Methods Documentation

load_dataframe(file_resources, blocksize=None)[source][source]#
Parameters
  • file_resources

  • blocksize